Unable to load OBO ontology

After doing a fresh install of the Add-in (Word 2010), I am not able to load an ontology for use with the Add-in. The select menu on the left-hand side of the Add-in does not display any ontologies...

Id #9298 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by paolop | Created: Aug 11, 2011 at 8:49 AM by whetzel

Feature Req: add support for Synonyms

The add-in should recognize term synonyms and allow markup. Perhaps even with the option to mark-up the synonym or to use the preferred term instead.

Id #6093 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by AlexWade | Created: May 10, 2010 at 10:17 PM by AlexWade

Remove redundant custom mark-up button

There appear to be two ways to add custom mark-up to a selected term - right-click on the selected term and click the InfoPane button "Mark-up selection." Only one of these is needed, preferably th...

Id #5590 | Release: Technology Preview, Beta 1 - December 2009 | Updated: Feb 14, 2013 at 1:10 AM by AlexWade | Created: Mar 4, 2010 at 1:44 AM by jlfink

Need smarttag option for marking-up all database IDs

There is a menu option that allows automatic mark-up of all future instances of ontology terms, but it doesn't exist for the database IDs.

Id #5587 | Release: Technology Preview, Beta 1 - December 2009 | Updated: Feb 14, 2013 at 1:10 AM by AlexWade | Created: Mar 4, 2010 at 1:38 AM by jlfink

Critical problem with the download progress window

Repro Steps: 1) Click on "Configure Add-in" button 2) Select list of ontologies from the Avaliable ontologies list 3) Click on Okay button 4) When the download progress window appears, just close t...

Id #4635 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by kodukula | Created: Nov 10, 2009 at 4:38 PM by kodukula

Addition of NIF ontology in 'Word Add-in for Ontology Recognition'

Hello, My name is Fahim Imam and I am involved with Neuroscience Information Framework (NIF) project http://neuinfo.org here at UCSD. As a critical component, NIF has developed a comprehensive onto...

Id #2648 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by jlfink | Created: Apr 7, 2009 at 3:03 AM by smtifahim

Provide mark-up statistics

It might be helpful to the user to have a list of all of the terms that have been added as mark-up in a document, whether or not those terms have been set to be automatically added for every instan...

Id #2407 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by jlfink | Created: Mar 25, 2009 at 8:19 PM by jlfink

Highlight Terms is faulty

After terms are marked-up and highlighting is turned on, the highlights never go away even when Highlight Terms is toggled. Also some terms never get highlighted even though they are marked-up. I ...

Id #2384 | Release: Technology Preview, Beta 1 - December 2009 | Updated: Feb 14, 2013 at 1:10 AM by erteam | Created: Mar 24, 2009 at 9:15 PM by jlfink

Database ID recognition does not toggle

If I have PDB ID turned on and I type a PDB ID, it is recognized. If I turn off PDB ID recognition in the config panel, the ID is still recognized. The behaviour I would expect is for the recogniti...

Id #2069 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by erteam | Created: Mar 12, 2009 at 12:31 AM by jlfink

Non-ideal ontology visualization in BROWSER

The ontology browser will not display accurate relationships between terms when these relationships are more complex. For example, some terms have two parents and the hierarchical tree visualizatio...

Id #1561 | Release: None | Updated: Feb 14, 2013 at 1:10 AM by jlfink | Created: Feb 6, 2009 at 6:56 AM by jlfink